Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | CAY62_RS06890 | Not Available | Positive | 1480558 - 1481430 | 31821.7 |
| formate-dependent phosphoribosylglycinamide formyltransferase | CAY62_RS06895 | Not Available | Positive | 1481604 - 1482779 | 42524.8 |
| thiopurine s-methyltransferase | CAY62_RS06900 | Not Available | Negative | 1482879 - 1483517 | 24393.0 |
| hypothetical protein | CAY62_RS06905 | Not Available | Negative | 1483830 - 1484123 | 11299.7 |
| nitrous oxide-stimulated promoter family protein | CAY62_RS06910 | Not Available | Positive | 1484362 - 1484790 | 16775.4 |
| hypothetical protein | CAY62_RS06915 | Not Available | Negative | 1484963 - 1485331 | 13366.2 |
| helicase-related protein | CAY62_RS06920 | Not Available | Negative | 1485360 - 1487759 | 90381.6 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | CAY62_RS06925 | Not Available | Positive | 1488020 - 1488916 | 33540.6 |
| nad-dependent malic enzyme | CAY62_RS06930 | Not Available | Positive | 1489357 - 1491045 | 62916.6 |
| vancomycin high temperature exclusion protein | CAY62_RS06935 | Not Available | Positive | 1491288 - 1491962 | 25634.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


