Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CAY62_RS06140 | Not Available | Positive | 1321423 - 1322406 | 38180.6 |
| duf411 domain-containing protein | CAY62_RS06145 | Not Available | Negative | 1322528 - 1322974 | 16598.2 |
| helix-turn-helix domain-containing protein | CAY62_RS06155 | Not Available | Positive | 1323701 - 1324054 | 13155.0 |
| phosphatase pap2 family protein | CAY62_RS06160 | Not Available | Negative | 1324150 - 1324785 | 24123.8 |
| n-acetylglucosamine-specific pts transporter subunit iibc | CAY62_RS06165 | Not Available | Positive | 1325258 - 1326625 | 48588.2 |
| response regulator transcription factor | CAY62_RS06170 | Not Available | Positive | 1326788 - 1327465 | 25394.8 |
| sensor histidine kinase | CAY62_RS06175 | Not Available | Positive | 1327446 - 1328756 | 48828.4 |
| duf3581 domain-containing protein | CAY62_RS06180 | Not Available | Negative | 1328822 - 1329541 | 27068.4 |
| amino acid abc transporter atp-binding protein | CAY62_RS06185 | Not Available | Positive | 1329841 - 1330416 | 21792.0 |
| bifunctional molybdopterin-guanine dinucleotide biosynthesis adaptor protein mobb/molybdopterin molybdotransferase moea | CAY62_RS06190 | Not Available | Negative | 1330856 - 1332640 | 64731.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


