Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25 | CAY62_RS06090 | Not Available | Negative | 1309730 - 1310008 | 10472.7 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | CAY62_RS06095 | Not Available | Positive | 1310324 - 1312489 | 80916.0 |
| dead/deah box helicase | CAY62_RS06100 | Not Available | Negative | 1312601 - 1314343 | 66052.1 |
| hypothetical protein | CAY62_RS06105 | Not Available | Positive | 1314531 - 1315028 | 18202.5 |
| gnat family n-acetyltransferase | CAY62_RS06110 | Not Available | Negative | 1315112 - 1315606 | 18526.5 |
| 16s rrna pseudouridine(516) synthase rsua | CAY62_RS06115 | Not Available | Positive | 1315983 - 1316681 | 26238.4 |
| bcr/cfla family multidrug efflux mfs transporter | CAY62_RS06120 | Not Available | Positive | 1316912 - 1318102 | 42679.5 |
| duf2913 family protein | CAY62_RS06125 | Not Available | Positive | 1318111 - 1318758 | 24255.8 |
| inosine/guanosine kinase | CAY62_RS06130 | Not Available | Negative | 1318975 - 1320279 | 49047.3 |
| duf2786 domain-containing protein | CAY62_RS06135 | Not Available | Negative | 1320570 - 1321268 | 26264.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


