Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein l,d-transpeptidase catalytic domain family protein | CAY62_RS05695 | Not Available | Negative | 1221767 - 1222417 | 24302.6 |
| chitinase c-terminal domain-containing protein | CAY62_RS05700 | Not Available | Negative | 1222938 - 1226099 | 113187.0 |
| duf2057 domain-containing protein | CAY62_RS05705 | Not Available | Negative | 1226568 - 1227197 | 22864.0 |
| class i sam-dependent methyltransferase | CAY62_RS05710 | Not Available | Negative | 1227482 - 1228672 | 44100.9 |
| acylphosphatase | CAY62_RS05715 | Not Available | Positive | 1228864 - 1229136 | 10020.1 |
| sulfurtransferase tuse | CAY62_RS05720 | Not Available | Negative | 1229267 - 1229596 | 12493.1 |
| bax inhibitor-1/ycca family protein | CAY62_RS05725 | Not Available | Negative | 1229730 - 1230392 | 23548.4 |
| ofa family mfs transporter | CAY62_RS05730 | Not Available | Negative | 1230941 - 1232170 | 43199.0 |
| sodium/glutamate symporter | CAY62_RS05735 | Not Available | Negative | 1232418 - 1233650 | 43955.8 |
| hypothetical protein | CAY62_RS05740 | Not Available | Negative | 1234550 - 1234903 | 13693.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


