Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fusc family protein | CAY62_RS05510 | Not Available | Positive | 1191538 - 1193478 | 75034.2 |
| energy-coupling factor transporter transmembrane component t family protein | CAY62_RS05515 | Not Available | Negative | 1193562 - 1194404 | 31856.2 |
| abc transporter atp-binding protein | CAY62_RS05520 | Not Available | Negative | 1194404 - 1196101 | 63082.1 |
| ecf-type riboflavin transporter substrate-binding protein | CAY62_RS05525 | Not Available | Negative | 1196104 - 1196655 | 19693.8 |
| uvry/sira/gaca family response regulator transcription factor | CAY62_RS05530 | Not Available | Positive | 1197396 - 1198040 | 23861.0 |
| excinuclease abc subunit uvrc | CAY62_RS05535 | Not Available | Positive | 1198124 - 1199893 | 67006.9 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | CAY62_RS05540 | Not Available | Positive | 1200010 - 1200570 | 21514.7 |
| Trna-cys | Not Available | Not Available | Positive | 1200901 - 1200974 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1200978 - 1201069 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 1201142 - 1201228 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


