Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lutb/lldf family l-lactate oxidation iron-sulfur protein | CAY62_RS05360 | Not Available | Negative | 1157672 - 1159087 | 52528.1 |
| (fe-s)-binding protein | CAY62_RS05365 | Not Available | Negative | 1159099 - 1159818 | 26271.1 |
| l-lactate permease | CAY62_RS05370 | Not Available | Negative | 1160000 - 1161583 | 56361.9 |
| lon peptidase substrate-binding domain-containing protein | CAY62_RS05375 | Not Available | Negative | 1162273 - 1162839 | 21686.8 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | CAY62_RS05380 | Not Available | Negative | 1162911 - 1164182 | 47048.7 |
| biotin synthase biob | CAY62_RS05385 | Not Available | Positive | 1164372 - 1165424 | 39448.5 |
| 8-amino-7-oxononanoate synthase | CAY62_RS05390 | Not Available | Positive | 1165408 - 1166601 | 43885.8 |
| malonyl-acp o-methyltransferase bioc | CAY62_RS05395 | Not Available | Positive | 1166594 - 1167460 | 31979.2 |
| amino acid abc transporter atp-binding protein | CAY62_RS05400 | Not Available | Positive | 1167466 - 1168137 | 24563.5 |
| hypothetical protein | CAY62_RS21755 | Not Available | Negative | 1168257 - 1168424 | 6187.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


