Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apc family permease | CAY62_RS05070 | Not Available | Negative | 1101686 - 1103080 | 50790.1 |
| dmt family transporter | CAY62_RS05075 | Not Available | Negative | 1103366 - 1104250 | 32451.6 |
| hypothetical protein | CAY62_RS05080 | Not Available | Negative | 1104610 - 1104906 | 11599.8 |
| hypothetical protein | CAY62_RS05085 | Not Available | Negative | 1105130 - 1105360 | 8576.11 |
| fad:protein fmn transferase | CAY62_RS05090 | Not Available | Positive | 1105583 - 1106644 | 39212.6 |
| amino acid abc transporter atp-binding protein | CAY62_RS05095 | Not Available | Positive | 1107252 - 1107944 | 25952.1 |
| is21 family transposase | CAY62_RS05100 | Not Available | Positive | 1108034 - 1109077 | 40000.6 |
| is21-like element helper atpase istb | CAY62_RS05105 | Not Available | Positive | 1109064 - 1109822 | 28681.8 |
| amino acid abc transporter atp-binding protein | CAY62_RS05110 | Not Available | Positive | 1109890 - 1110495 | 24034.4 |
| Trna-val | Not Available | Not Available | Positive | 1110593 - 1110669 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


