Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate decarboxylase | CAY62_RS05020 | Not Available | Negative | 1091570 - 1092277 | 26255.3 |
| acetolactate synthase alss | CAY62_RS05025 | Not Available | Negative | 1092300 - 1093964 | 60099.8 |
| ribokinase | CAY62_RS05030 | Not Available | Negative | 1094390 - 1095313 | 32669.9 |
| grp family sugar transporter | CAY62_RS05035 | Not Available | Negative | 1095333 - 1096334 | 35370.0 |
| pfkb family carbohydrate kinase | CAY62_RS05040 | Not Available | Negative | 1096435 - 1097655 | 45041.9 |
| hypothetical protein | CAY62_RS05045 | Not Available | Negative | 1097856 - 1099010 | 44110.5 |
| gtra family protein | CAY62_RS05050 | Not Available | Negative | 1099007 - 1099387 | 14411.9 |
| glycosyltransferase family 2 protein | CAY62_RS05055 | Not Available | Negative | 1099380 - 1100360 | 37163.9 |
| hypothetical protein | CAY62_RS05060 | Not Available | Negative | 1100353 - 1100913 | 21015.3 |
| dmt family transporter | CAY62_RS05065 | Not Available | Positive | 1101249 - 1101602 | 12449.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


