Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator ebgr | CAY62_RS04665 | Not Available | Negative | 1008231 - 1009217 | 36856.1 |
| pp_00857 | CAY62_RS04670 | Not Available | Positive | 1009552 - 1009884 | Not Available |
| l-threonine dehydrogenase | CAY62_RS04675 | Not Available | Positive | 1010670 - 1011818 | 40292.7 |
| hypothetical protein | CAY62_RS04680 | Not Available | Negative | 1011917 - 1012114 | 8016.52 |
| hypothetical protein | CAY62_RS04685 | Not Available | Negative | 1012138 - 1012431 | 11262.7 |
| hypothetical protein | CAY62_RS04690 | Not Available | Negative | 1012431 - 1012922 | 19142.3 |
| cardiolipin synthase | CAY62_RS04695 | Not Available | Negative | 1013112 - 1014575 | 55472.7 |
| amino acid abc transporter atp-binding protein | CAY62_RS04700 | Not Available | Positive | 1015089 - 1016039 | 33914.4 |
| is21-like element helper atpase istb | CAY62_RS04705 | Not Available | Negative | 1016107 - 1016865 | 28681.8 |
| is21 family transposase | CAY62_RS04710 | Not Available | Negative | 1016852 - 1017895 | 40000.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


