Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein transport protein | CAY62_RS03725 | Not Available | Negative | 804822 - 806156 | 47528.5 |
| outer membrane protein transport protein | CAY62_RS03730 | Not Available | Negative | 806522 - 807751 | 44625.3 |
| duf3379 family protein | CAY62_RS03735 | Not Available | Negative | 808140 - 808853 | 26087.3 |
| sigma-70 family rna polymerase sigma factor | CAY62_RS03740 | Not Available | Negative | 808840 - 809409 | 22372.6 |
| acetyl-coa c-acyltransferase fadi | CAY62_RS03745 | Not Available | Positive | 810059 - 811369 | 46544.2 |
| fatty acid oxidation complex subunit alpha fadj | CAY62_RS03750 | Not Available | Positive | 811369 - 813489 | 77452.9 |
| insulinase family protein | CAY62_RS03755 | Not Available | Negative | 814035 - 816800 | 105911.0 |
| phosphohistidine phosphatase sixa | CAY62_RS03760 | Not Available | Positive | 817150 - 817623 | 17729.9 |
| hypothetical protein | CAY62_RS03765 | Not Available | Positive | 817649 - 818011 | 13048.9 |
| endonuclease smrb | CAY62_RS03770 | Not Available | Negative | 818106 - 818636 | 20029.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


