Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body-associated protein flil | CAY62_RS03575 | Not Available | Positive | 777326 - 777790 | 17192.9 |
| flagellar motor switch protein flim | CAY62_RS03580 | Not Available | Positive | 777798 - 778841 | 39335.5 |
| flagellar motor switch protein flin | CAY62_RS03585 | Not Available | Positive | 778856 - 779242 | 14138.8 |
| flagellar biosynthetic protein flio | CAY62_RS03590 | Not Available | Positive | 779242 - 779580 | 12264.2 |
| flagellar type iii secretion system pore protein flip | CAY62_RS03595 | Not Available | Positive | 779597 - 780385 | 28352.6 |
| flagellar biosynthesis protein fliq | CAY62_RS03600 | Not Available | Positive | 780382 - 780651 | 10096.0 |
| flagellar biosynthetic protein flir | CAY62_RS03605 | Not Available | Positive | 780664 - 781446 | 29052.6 |
| flagellar biosynthesis protein flhb | CAY62_RS03610 | Not Available | Positive | 781518 - 782648 | 42061.4 |
| flagellar biosynthesis protein flha | CAY62_RS03615 | Not Available | Positive | 782895 - 785000 | 75971.5 |
| flagellar biosynthesis protein flhf | CAY62_RS03620 | Not Available | Positive | 785040 - 786626 | 59542.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


