Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body p-ring formation chaperone flga | CAY62_RS03420 | Not Available | Negative | 745533 - 746228 | 25255.6 |
| chemotaxis protein chev | CAY62_RS03425 | Not Available | Positive | 746321 - 747244 | 34082.3 |
| cher family methyltransferase | CAY62_RS03430 | Not Available | Positive | 747413 - 748237 | 30926.8 |
| flagellar basal body rod protein flgb | CAY62_RS03435 | Not Available | Positive | 748365 - 748772 | 14356.9 |
| flagellar basal body rod protein flgc | CAY62_RS03440 | Not Available | Positive | 748776 - 749195 | 15133.8 |
| flagellar hook assembly protein flgd | CAY62_RS03445 | Not Available | Positive | 749219 - 749950 | 25976.6 |
| flagellar hook protein flge | CAY62_RS03450 | Not Available | Positive | 749950 - 751299 | 48452.9 |
| flagellar basal-body rod protein flgf | CAY62_RS03455 | Not Available | Positive | 751556 - 752305 | 27105.3 |
| flagellar basal-body rod protein flgg | CAY62_RS03460 | Not Available | Positive | 752322 - 753110 | 27942.0 |
| flagellar basal body l-ring protein flgh | CAY62_RS03465 | Not Available | Positive | 753122 - 753901 | 27995.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


