Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ampg family muropeptide mfs transporter | CAY62_RS03115 | Not Available | Negative | 689741 - 691126 | 50620.6 |
| hypothetical protein | CAY62_RS03120 | Not Available | Negative | 691251 - 691610 | 13753.1 |
| peptidylprolyl isomerase | CAY62_RS03125 | Not Available | Negative | 691654 - 692205 | 19924.3 |
| yajg family lipoprotein | CAY62_RS03130 | Not Available | Negative | 692205 - 692789 | 21378.7 |
| methyltransferase | CAY62_RS03135 | Not Available | Negative | 692817 - 693941 | 41934.9 |
| transcriptional regulator bola | CAY62_RS03140 | Not Available | Positive | 694055 - 694366 | 11630.8 |
| na(+)-translocating nadh-quinone reductase subunit a | CAY62_RS03145 | Not Available | Positive | 694977 - 696317 | 48536.6 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | CAY62_RS03150 | Not Available | Positive | 696321 - 697565 | 45409.9 |
| na(+)-translocating nadh-quinone reductase subunit c | CAY62_RS03155 | Not Available | Positive | 697555 - 698349 | 28768.3 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | CAY62_RS03160 | Not Available | Positive | 698342 - 698974 | 22771.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


