Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CAY62_RS02320 | Not Available | Positive | 522582 - 522926 | 13241.8 |
| sce7726 family protein | CAY62_RS02325 | Not Available | Positive | 523152 - 523775 | 23943.9 |
| beta family protein | CAY62_RS02330 | Not Available | Negative | 523755 - 524828 | 41235.5 |
| imma/irre family metallo-endopeptidase | CAY62_RS02335 | Not Available | Negative | 524825 - 525367 | 20379.1 |
| phosphohydrolase | CAY62_RS02340 | Not Available | Negative | 525368 - 526009 | 23687.6 |
| aaa family atpase | CAY62_RS02345 | Not Available | Negative | 526371 - 527015 | 23235.6 |
| aaa family atpase | CAY62_RS22170 | Not Available | Negative | 527002 - 527283 | 10149.4 |
| hypothetical protein | CAY62_RS02350 | Not Available | Negative | 527509 - 527763 | 9971.47 |
| site-specific integrase | CAY62_RS21855 | Not Available | Negative | 527760 - 528428 | 25793.0 |
| hypothetical protein | CAY62_RS21860 | Not Available | Negative | 528552 - 529031 | 18327.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


