Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00153 family protein | CAY62_RS01420 | Not Available | Negative | 293506 - 294186 | 25882.7 |
| inorganic triphosphatase | CAY62_RS01425 | Not Available | Positive | 294371 - 295885 | 58433.6 |
| hypothetical protein | CAY62_RS01430 | Not Available | Negative | 295904 - 296074 | 6960.17 |
| bifunctional | CAY62_RS01435 | Not Available | Positive | 296276 - 299146 | 110084.0 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | CAY62_RS01440 | Not Available | Positive | 299235 - 300668 | 50703.9 |
| outer membrane channel protein tolc | CAY62_RS01445 | Not Available | Negative | 300784 - 302097 | 47671.7 |
| adp-ribose diphosphatase | CAY62_RS01450 | Not Available | Positive | 302464 - 303099 | 23760.3 |
| duf1249 domain-containing protein | CAY62_RS01455 | Not Available | Positive | 303164 - 303559 | 15687.0 |
| 3',5'-cyclic-amp phosphodiesterase | CAY62_RS01460 | Not Available | Positive | 303595 - 304422 | 30682.3 |
| esterase yqia | CAY62_RS01465 | Not Available | Positive | 304422 - 305000 | 22204.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


