Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate adenylyltransferase subunit cysn | CAY62_RS01075 | Not Available | Positive | 211315 - 212739 | 52553.8 |
| slc13 family permease | CAY62_RS01080 | Not Available | Positive | 212746 - 214482 | 62159.9 |
| adenylyl-sulfate kinase | CAY62_RS01085 | Not Available | Positive | 214501 - 215118 | 23201.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | CAY62_RS01090 | Not Available | Positive | 215136 - 215876 | 27056.5 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 216468 - 218019 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 218351 - 221242 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 221403 - 221518 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 221650 - 221726 | Not Available |
| tigr03899 family protein | CAY62_RS01115 | Not Available | Negative | 222069 - 222893 | 31693.1 |
| ytfj family protein | CAY62_RS01120 | Not Available | Negative | 223000 - 223554 | 20219.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


