Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase | CAY62_RS00720 | Not Available | Negative | 156113 - 156841 | 26720.7 |
| methyl-accepting chemotaxis protein | CAY62_RS00725 | Not Available | Negative | 157016 - 158896 | 67894.2 |
| amino acid abc transporter atp-binding protein | CAY62_RS00730 | Not Available | Negative | 159094 - 160504 | 51052.3 |
| archaetidylserine decarboxylase | CAY62_RS00735 | Not Available | Negative | 160646 - 161527 | 32464.9 |
| small ribosomal subunit biogenesis gtpase rsga | CAY62_RS00740 | Not Available | Negative | 161722 - 162777 | 39728.9 |
| oligoribonuclease | CAY62_RS00745 | Not Available | Positive | 162851 - 163396 | 21010.1 |
| Trna-met | Not Available | Not Available | Positive | 163529 - 163605 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 163609 - 163684 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 163725 - 163801 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 163804 - 163879 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


