Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf294 nucleotidyltransferase-like domain-containing protein | CAY62_RS00060 | Not Available | Negative | 13953 - 15815 | 70610.0 |
| hypothetical protein | CAY62_RS22160 | Not Available | Negative | 15957 - 16085 | 4169.08 |
| adenosine deaminase | CAY62_RS00065 | Not Available | Negative | 16267 - 17271 | 36305.6 |
| nitrogen regulation protein nr(i) | CAY62_RS00070 | Not Available | Negative | 17464 - 18876 | 52703.0 |
| nitrogen regulation protein nr(ii) | CAY62_RS00075 | Not Available | Negative | 18894 - 19955 | 39246.9 |
| duf4124 domain-containing protein | CAY62_RS00080 | Not Available | Negative | 20056 - 20622 | 20906.1 |
| glutamate--ammonia ligase | CAY62_RS00085 | Not Available | Negative | 20747 - 22156 | 51630.2 |
| translational gtpase typa | CAY62_RS00090 | Not Available | Positive | 22740 - 24569 | 67299.1 |
| amino acid abc transporter atp-binding protein | CAY62_RS00095 | Not Available | Positive | 24672 - 24818 | 5497.48 |
| duf2959 domain-containing protein | CAY62_RS00100 | Not Available | Negative | 24840 - 25487 | 24273.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


