Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme no-binding domain-containing protein | CAY62_RS19720 | Not Available | Negative | 1083771 - 1084304 | 20068.3 |
| is630 family transposase | CAY62_RS19725 | Not Available | Positive | 1084457 - 1085488 | 39175.8 |
| hypothetical protein | CAY62_RS19730 | Not Available | Negative | 1085594 - 1086106 | 19509.9 |
| nitroreductase family protein | CAY62_RS19735 | Not Available | Negative | 1086208 - 1086936 | 27767.5 |
| hth-type transcriptional regulator sgrr | CAY62_RS19740 | Not Available | Positive | 1087197 - 1088885 | 65120.8 |
| serine hydrolase | CAY62_RS19745 | Not Available | Negative | 1088957 - 1090201 | 46334.8 |
| hypothetical protein | CAY62_RS19750 | Not Available | Negative | 1090269 - 1090727 | 18222.8 |
| phosphotransferase | CAY62_RS19755 | Not Available | Positive | 1091177 - 1092067 | 34487.9 |
| duf2797 domain-containing protein | CAY62_RS19760 | Not Available | Negative | 1092116 - 1092934 | 30723.0 |
| transcriptional regulator | CAY62_RS19765 | Not Available | Negative | 1092983 - 1094269 | 49273.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


