Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CAY62_RS19400 | Not Available | Positive | 1010519 - 1010836 | 11875.0 |
| hypothetical protein | CAY62_RS19405 | Not Available | Positive | 1010894 - 1011073 | 6792.17 |
| serine/threonine transporter sstt | CAY62_RS19410 | Not Available | Negative | 1011193 - 1012443 | 43198.6 |
| batd family protein | CAY62_RS19415 | Not Available | Negative | 1012960 - 1014669 | 62520.5 |
| vwa domain-containing protein | CAY62_RS19420 | Not Available | Negative | 1014676 - 1016718 | 77172.4 |
| vwa domain-containing protein | CAY62_RS19425 | Not Available | Negative | 1016711 - 1017676 | 35941.1 |
| duf4381 domain-containing protein | CAY62_RS19430 | Not Available | Negative | 1017683 - 1018165 | 18469.4 |
| duf58 domain-containing protein | CAY62_RS19435 | Not Available | Negative | 1018162 - 1019109 | 36253.6 |
| aaa family atpase | CAY62_RS19440 | Not Available | Negative | 1019106 - 1020062 | 35601.1 |
| undecaprenyl-phosphate glucose phosphotransferase | CAY62_RS19445 | Not Available | Positive | 1020415 - 1021824 | 53206.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


