Pseudorhodoplanes sinuspersici strain RIPI110

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Genus

Pseudorhodoplanes

Description

Pseudorhodoplanes sinuspersici strain RIPI110 is characterized by a single replicon and is cataloged under the accession number NZ_CP021112.1. This strain is part of the diverse group of photosynthetic bacteria, which typically exhibit unique metabolic pathways and can be found in a variety of ecological niches. The presence of a single replicon suggests a streamlined genomic organization that may facilitate specific adaptations to its environment. While the precise ecological role of Pseudorhodoplanes sinuspersici strain RIPI110 is not detailed in the provided information, the genus Pseudorhodoplanes is known for its ability to perform anoxygenic photosynthesis. This trait highlights its potential significance in biogeochemical cycles, particularly in environments where oxygen is scarce. Anoxygenic photosynthetic bacteria are crucial for carbon cycling in anaerobic conditions and may play a role in the degradation of organic matter, contributing to nutrient cycling within their ecosystems. In summary, Pseudorhodoplanes sinuspersici strain RIPI110, with its single replicon and specific genetic identification, represents a valuable entity within microbial communities. Its metabolic capabilities may provide insights into the ecological dynamics of its habitat, particularly in relation to carbon cycling and the functioning of anaerobic environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudorhodoplanes sinuspersici strain RIPI110 chromosome, complete

Gene Summary

Adenine Count

1184536 bp

Thymine Count

1185259 bp

Guanine Count

1803476 bp

Cytosine Count

1798344 bp

Genome Length

5971615 bp

Protein-coding Genes

5669 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseCAK95_RS02800Not AvailablePositive561275 - 56212029939.9
succinyl-diaminopimelate desuccinylaseCAK95_RS02805Not AvailablePositive562123 - 56328041085.9
phosphoenolpyruvate carboxylaseCAK95_RS02810Not AvailablePositive563555 - 566302101813.0
duf1772 domain-containing proteinCAK95_RS02815Not AvailableNegative566310 - 56678016919.0
marr family winged helix-turn-helix transcriptional regulatorCAK95_RS02820Not AvailableNegative566783 - 56726517477.4
trna pseudouridine(38-40) synthase truaCAK95_RS02825Not AvailableNegative567300 - 56803727496.5
gnat family n-acetyltransferaseCAK95_RS02830Not AvailableNegative568041 - 56854117635.0
pyridoxamine 5'-phosphate oxidase family proteinCAK95_RS02835Not AvailablePositive568681 - 56922920613.8
methionyl-trna formyltransferaseCAK95_RS02840Not AvailableNegative569260 - 57019233165.5
peptide deformylaseCAK95_RS02845Not AvailableNegative570192 - 57070719492.8

Displaying genes 621 – 630 of 5778 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.