Pseudorhodoplanes sinuspersici strain RIPI110

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Genus

Pseudorhodoplanes

Description

Pseudorhodoplanes sinuspersici strain RIPI110 is characterized by a single replicon and is cataloged under the accession number NZ_CP021112.1. This strain is part of the diverse group of photosynthetic bacteria, which typically exhibit unique metabolic pathways and can be found in a variety of ecological niches. The presence of a single replicon suggests a streamlined genomic organization that may facilitate specific adaptations to its environment. While the precise ecological role of Pseudorhodoplanes sinuspersici strain RIPI110 is not detailed in the provided information, the genus Pseudorhodoplanes is known for its ability to perform anoxygenic photosynthesis. This trait highlights its potential significance in biogeochemical cycles, particularly in environments where oxygen is scarce. Anoxygenic photosynthetic bacteria are crucial for carbon cycling in anaerobic conditions and may play a role in the degradation of organic matter, contributing to nutrient cycling within their ecosystems. In summary, Pseudorhodoplanes sinuspersici strain RIPI110, with its single replicon and specific genetic identification, represents a valuable entity within microbial communities. Its metabolic capabilities may provide insights into the ecological dynamics of its habitat, particularly in relation to carbon cycling and the functioning of anaerobic environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudorhodoplanes sinuspersici strain RIPI110 chromosome, complete

Gene Summary

Adenine Count

1184536 bp

Thymine Count

1185259 bp

Guanine Count

1803476 bp

Cytosine Count

1798344 bp

Genome Length

5971615 bp

Protein-coding Genes

5669 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sensor domain-containing diguanylate cyclaseCAK95_RS20595Not AvailableNegative4243582 - 424476943525.5
sdr family oxidoreductaseCAK95_RS20600Not AvailableNegative4244934 - 424568626498.2
putative bifunctional diguanylate cyclase/phosphodiesteraseCAK95_RS20605Not AvailableNegative4245900 - 424816482858.4
peptidaseCAK95_RS20610Not AvailableNegative4248330 - 424907627476.2
transglutaminase family proteinCAK95_RS20615Not AvailableNegative4249213 - 425003430106.4
alpha-e domain-containing proteinCAK95_RS20620Not AvailableNegative4250116 - 425105736156.7
circularly permuted type 2 atp-grasp proteinCAK95_RS20625Not AvailableNegative4251057 - 425247552566.3
competence/damage-inducible protein aCAK95_RS20630Not AvailablePositive4252687 - 425343926907.4
intradiol ring-cleavage dioxygenaseCAK95_RS20635Not AvailablePositive4253605 - 425415919931.7
xanthine phosphoribosyltransferaseCAK95_RS20640Not AvailablePositive4254271 - 425477418015.7

Displaying genes 4131 – 4140 of 5778 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.