Pseudorhodoplanes sinuspersici strain RIPI110

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Genus

Pseudorhodoplanes

Description

Pseudorhodoplanes sinuspersici strain RIPI110 is characterized by a single replicon and is cataloged under the accession number NZ_CP021112.1. This strain is part of the diverse group of photosynthetic bacteria, which typically exhibit unique metabolic pathways and can be found in a variety of ecological niches. The presence of a single replicon suggests a streamlined genomic organization that may facilitate specific adaptations to its environment. While the precise ecological role of Pseudorhodoplanes sinuspersici strain RIPI110 is not detailed in the provided information, the genus Pseudorhodoplanes is known for its ability to perform anoxygenic photosynthesis. This trait highlights its potential significance in biogeochemical cycles, particularly in environments where oxygen is scarce. Anoxygenic photosynthetic bacteria are crucial for carbon cycling in anaerobic conditions and may play a role in the degradation of organic matter, contributing to nutrient cycling within their ecosystems. In summary, Pseudorhodoplanes sinuspersici strain RIPI110, with its single replicon and specific genetic identification, represents a valuable entity within microbial communities. Its metabolic capabilities may provide insights into the ecological dynamics of its habitat, particularly in relation to carbon cycling and the functioning of anaerobic environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudorhodoplanes sinuspersici strain RIPI110 chromosome, complete

Gene Summary

Adenine Count

1184536 bp

Thymine Count

1185259 bp

Guanine Count

1803476 bp

Cytosine Count

1798344 bp

Genome Length

5971615 bp

Protein-coding Genes

5669 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfotransferase family proteinCAK95_RS13925Not AvailablePositive2886887 - 288774432346.8
n-formylglutamate amidohydrolaseCAK95_RS13930Not AvailableNegative2887764 - 288855529678.4
transglutaminase family proteinCAK95_RS13935Not AvailablePositive2888734 - 288961233131.5
transglutaminase-like domain-containing proteinCAK95_RS13940Not AvailablePositive2889758 - 289056429733.5
lysozyme inhibitor lpri family proteinCAK95_RS13945Not AvailableNegative2890599 - 289095213116.0
class i sam-dependent methyltransferaseCAK95_RS13950Not AvailableNegative2891068 - 289191031601.4
dna primaseCAK95_RS13955Not AvailablePositive2892118 - 289406171832.9
rna polymerase sigma factor rpodCAK95_RS13960Not AvailablePositive2894303 - 289662186094.1
alpha/beta hydrolase family proteinCAK95_RS13965Not AvailablePositive2896957 - 289803938243.8
phytanoyl-coa dioxygenase family proteinCAK95_RS13970Not AvailablePositive2898165 - 289901030529.4

Displaying genes 2821 – 2830 of 5778 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.