Pseudorhodoplanes sinuspersici strain RIPI110

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Genus

Pseudorhodoplanes

Description

Pseudorhodoplanes sinuspersici strain RIPI110 is characterized by a single replicon and is cataloged under the accession number NZ_CP021112.1. This strain is part of the diverse group of photosynthetic bacteria, which typically exhibit unique metabolic pathways and can be found in a variety of ecological niches. The presence of a single replicon suggests a streamlined genomic organization that may facilitate specific adaptations to its environment. While the precise ecological role of Pseudorhodoplanes sinuspersici strain RIPI110 is not detailed in the provided information, the genus Pseudorhodoplanes is known for its ability to perform anoxygenic photosynthesis. This trait highlights its potential significance in biogeochemical cycles, particularly in environments where oxygen is scarce. Anoxygenic photosynthetic bacteria are crucial for carbon cycling in anaerobic conditions and may play a role in the degradation of organic matter, contributing to nutrient cycling within their ecosystems. In summary, Pseudorhodoplanes sinuspersici strain RIPI110, with its single replicon and specific genetic identification, represents a valuable entity within microbial communities. Its metabolic capabilities may provide insights into the ecological dynamics of its habitat, particularly in relation to carbon cycling and the functioning of anaerobic environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudorhodoplanes sinuspersici strain RIPI110 chromosome, complete

Gene Summary

Adenine Count

1184536 bp

Thymine Count

1185259 bp

Guanine Count

1803476 bp

Cytosine Count

1798344 bp

Genome Length

5971615 bp

Protein-coding Genes

5669 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate kinaseCAK95_RS10500Not AvailablePositive2155580 - 215619421917.4
3-dehydroquinate synthaseCAK95_RS10505Not AvailablePositive2156191 - 215731840100.2
hlyc/corc family transporterCAK95_RS10510Not AvailablePositive2157322 - 215860247050.9
lysr family transcriptional regulatorCAK95_RS10515Not AvailablePositive2159340 - 216022732073.8
bola family proteinCAK95_RS10520Not AvailableNegative2160262 - 21605349703.42
j domain-containing proteinCAK95_RS10525Not AvailablePositive2160679 - 216130223757.8
cobaltochelatase subunit cobsCAK95_RS10530Not AvailablePositive2161516 - 216251437208.4
cobaltochelatase subunit cobtCAK95_RS10535Not AvailablePositive2162560 - 216446771392.3
esterase-like activity of phytase family proteinCAK95_RS10540Not AvailablePositive2164497 - 216552836668.3
50s ribosomal protein l28CAK95_RS10545Not AvailableNegative2165591 - 216588110657.0

Displaying genes 2131 – 2140 of 5778 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.