Pseudorhodoplanes sinuspersici strain RIPI110

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Genus

Pseudorhodoplanes

Description

Pseudorhodoplanes sinuspersici strain RIPI110 is characterized by a single replicon and is cataloged under the accession number NZ_CP021112.1. This strain is part of the diverse group of photosynthetic bacteria, which typically exhibit unique metabolic pathways and can be found in a variety of ecological niches. The presence of a single replicon suggests a streamlined genomic organization that may facilitate specific adaptations to its environment. While the precise ecological role of Pseudorhodoplanes sinuspersici strain RIPI110 is not detailed in the provided information, the genus Pseudorhodoplanes is known for its ability to perform anoxygenic photosynthesis. This trait highlights its potential significance in biogeochemical cycles, particularly in environments where oxygen is scarce. Anoxygenic photosynthetic bacteria are crucial for carbon cycling in anaerobic conditions and may play a role in the degradation of organic matter, contributing to nutrient cycling within their ecosystems. In summary, Pseudorhodoplanes sinuspersici strain RIPI110, with its single replicon and specific genetic identification, represents a valuable entity within microbial communities. Its metabolic capabilities may provide insights into the ecological dynamics of its habitat, particularly in relation to carbon cycling and the functioning of anaerobic environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudorhodoplanes sinuspersici strain RIPI110 chromosome, complete

Gene Summary

Adenine Count

1184536 bp

Thymine Count

1185259 bp

Guanine Count

1803476 bp

Cytosine Count

1798344 bp

Genome Length

5971615 bp

Protein-coding Genes

5669 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCAK95_RS05780Not AvailableNegative1159863 - 11601058651.19
Trna-glyNot AvailableNot AvailablePositive1160204 - 1160277Not Available
lysr substrate-binding domain-containing proteinCAK95_RS05790Not AvailableNegative1160868 - 116174331666.9
muconate/chloromuconate family cycloisomeraseCAK95_RS05795Not AvailablePositive1161859 - 116300140816.0
muconolactone delta-isomeraseCAK95_RS05800Not AvailablePositive1163014 - 116329510617.9
bug family tripartite tricarboxylate transporter substrate binding proteinCAK95_RS05805Not AvailablePositive1163310 - 116428433659.7
2'-deoxycytidine 5'-triphosphate deaminaseCAK95_RS05810Not AvailableNegative1164358 - 116546740026.8
sgnh/gdsl hydrolase family proteinCAK95_RS05815Not AvailableNegative1165571 - 116640729609.0
sgnh/gdsl hydrolase family proteinCAK95_RS05820Not AvailableNegative1166404 - 116719828822.8
opgc family proteinCAK95_RS05825Not AvailableNegative1167243 - 116837342537.0

Displaying genes 1191 – 1200 of 5778 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.