Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Genus
Pseudorhodoplanes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=family&order=Hyphomicrobiales&phylum=Pseudomonadota |
| Genus | Pseudorhodoplanes |
| Species | Pseudorhodoplanes sinuspersici |
| Strain | strain RIPI110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1184536 bp
Thymine Count
1185259 bp
Guanine Count
1803476 bp
Cytosine Count
1798344 bp
Genome Length
5971615 bp
Protein-coding Genes
5669 genes
Non-Coding Genes
109 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligase-associated dna damage response endonuclease pdem | CAK95_RS05635 | Not Available | Negative | 1128678 - 1129415 | 26221.4 |
| ligase-associated dna damage response dexh box helicase | CAK95_RS05640 | Not Available | Negative | 1129418 - 1131979 | 94547.4 |
| methyltransferase domain-containing protein | CAK95_RS05645 | Not Available | Negative | 1131989 - 1132954 | 34689.4 |
| ligase-associated dna damage response exonuclease | CAK95_RS05650 | Not Available | Positive | 1133008 - 1134054 | 37988.2 |
| cisplatin damage response atp-dependent dna ligase | CAK95_RS05655 | Not Available | Positive | 1134051 - 1135721 | 62629.9 |
| duf6460 domain-containing protein | CAK95_RS05660 | Not Available | Positive | 1135810 - 1136145 | 12373.3 |
| quinone-dependent dihydroorotate dehydrogenase | CAK95_RS05665 | Not Available | Negative | 1136254 - 1137351 | 39504.8 |
| helix-turn-helix transcriptional regulator | CAK95_RS05670 | Not Available | Positive | 1137633 - 1138262 | 22458.9 |
| lysine--trna ligase | CAK95_RS05675 | Not Available | Negative | 1138329 - 1139957 | 60770.3 |
| transporter substrate-binding domain-containing protein | CAK95_RS05680 | Not Available | Negative | 1140028 - 1140822 | 29738.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
