Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Nitrosomonadales
Family
Nitrosomonadaceae
Genus
Nitrosospira
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Nitrosomonadales |
| Family | Nitrosomonadaceae |
| Genus | Nitrosospira |
| Species | Nitrosospira lacus |
| Strain | strain APG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerobic agricultural surface soils; freshwater lake sediment; terrestrial niche |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
761258 bp
Thymine Count
750491 bp
Guanine Count
874564 bp
Cytosine Count
874775 bp
Genome Length
3261088 bp
Protein-coding Genes
2846 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide transport periplasmic protein lpta | EBAPG3_RS02310 | Not Available | Negative | 512032 - 512580 | 20627.4 |
| lps export abc transporter periplasmic protein lptc | EBAPG3_RS02315 | Not Available | Negative | 512659 - 513237 | 21050.4 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | EBAPG3_RS02320 | Not Available | Negative | 513234 - 513758 | 18952.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | EBAPG3_RS02325 | Not Available | Negative | 514001 - 514945 | 34614.8 |
| cobalamin-binding protein | EBAPG3_RS02335 | Not Available | Negative | 515309 - 516184 | 31559.0 |
| 2-keto-3-deoxy-d-arabino-heptulosonate-7- phosphate synthase i beta | EBAPG3_RS02340 | Not Available | Negative | 516441 - 517565 | 41844.7 |
| yajd family hnh nuclease | EBAPG3_RS02345 | Not Available | Positive | 517789 - 518166 | 14474.9 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | EBAPG3_RS02350 | Not Available | Positive | 518215 - 519204 | 37349.5 |
| bon domain-containing protein | EBAPG3_RS02355 | Not Available | Positive | 519274 - 519633 | 12810.7 |
| acyl-coa dehydrogenase | EBAPG3_RS02360 | Not Available | Positive | 519702 - 522074 | 85787.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
