Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Nitrosomonadales
Family
Nitrosomonadaceae
Genus
Nitrosospira
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Nitrosomonadales |
| Family | Nitrosomonadaceae |
| Genus | Nitrosospira |
| Species | Nitrosospira lacus |
| Strain | strain APG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerobic agricultural surface soils; freshwater lake sediment; terrestrial niche |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
761258 bp
Thymine Count
750491 bp
Guanine Count
874564 bp
Cytosine Count
874775 bp
Genome Length
3261088 bp
Protein-coding Genes
2846 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase formation protein hypd | EBAPG3_RS14480 | Not Available | Negative | 3174443 - 3175576 | 40344.9 |
| hydrogenase nickel incorporation protein hypb | EBAPG3_RS14485 | Not Available | Negative | 3175573 - 3176307 | 27215.5 |
| hydrogenase maturation nickel metallochaperone hypa | EBAPG3_RS14490 | Not Available | Negative | 3176369 - 3176755 | 13396.3 |
| hypc/hybg/hupf family hydrogenase formation chaperone | EBAPG3_RS14495 | Not Available | Negative | 3176730 - 3176948 | 7877.43 |
| hypothetical protein | EBAPG3_RS14500 | Not Available | Positive | 3177256 - 3178764 | 56581.9 |
| duf3047 domain-containing protein | EBAPG3_RS14505 | Not Available | Positive | 3178779 - 3179420 | 24067.2 |
| slp family lipoprotein | EBAPG3_RS14510 | Not Available | Positive | 3179755 - 3180306 | 20832.7 |
| hypothetical protein | EBAPG3_RS14515 | Not Available | Positive | 3180473 - 3181723 | 46083.8 |
| tir domain-containing protein | EBAPG3_RS14520 | Not Available | Negative | 3181907 - 3182296 | 14762.8 |
| rida family protein | EBAPG3_RS14525 | Not Available | Negative | 3182378 - 3182770 | 14394.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
