Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Nitrosomonadales
Family
Nitrosomonadaceae
Genus
Nitrosospira
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Nitrosomonadales |
| Family | Nitrosomonadaceae |
| Genus | Nitrosospira |
| Species | Nitrosospira lacus |
| Strain | strain APG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerobic agricultural surface soils; freshwater lake sediment; terrestrial niche |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
761258 bp
Thymine Count
750491 bp
Guanine Count
874564 bp
Cytosine Count
874775 bp
Genome Length
3261088 bp
Protein-coding Genes
2846 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase domain-containing protein | EBAPG3_RS12015 | Not Available | Positive | 2635750 - 2636685 | 34367.3 |
| response regulator | EBAPG3_RS12020 | Not Available | Positive | 2636945 - 2637790 | 32132.2 |
| trna pseudouridine(55) synthase trub | EBAPG3_RS12025 | Not Available | Negative | 2637793 - 2638752 | 34425.0 |
| 30s ribosome-binding factor rbfa | EBAPG3_RS12030 | Not Available | Negative | 2638792 - 2639172 | 14551.4 |
| translation initiation factor if-2 | EBAPG3_RS12035 | Not Available | Negative | 2639206 - 2641827 | 94258.8 |
| transcription termination factor nusa | EBAPG3_RS12040 | Not Available | Negative | 2641846 - 2643336 | 55631.4 |
| ribosome maturation factor rimp | EBAPG3_RS12045 | Not Available | Negative | 2643365 - 2643793 | 15798.2 |
| acetate--coa ligase | EBAPG3_RS12050 | Not Available | Positive | 2644015 - 2645982 | 72137.1 |
| mbl fold metallo-hydrolase | EBAPG3_RS12055 | Not Available | Positive | 2646007 - 2647005 | 36642.7 |
| atp-binding protein | EBAPG3_RS12060 | Not Available | Positive | 2647540 - 2649780 | 82970.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
