Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Nitrosomonadales
Family
Nitrosomonadaceae
Genus
Nitrosospira
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Nitrosomonadales |
| Family | Nitrosomonadaceae |
| Genus | Nitrosospira |
| Species | Nitrosospira lacus |
| Strain | strain APG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerobic agricultural surface soils; freshwater lake sediment; terrestrial niche |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
761258 bp
Thymine Count
750491 bp
Guanine Count
874564 bp
Cytosine Count
874775 bp
Genome Length
3261088 bp
Protein-coding Genes
2846 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease | EBAPG3_RS09420 | Not Available | Positive | 2096569 - 2097495 | 34703.9 |
| integrase core domain-containing protein | EBAPG3_RS09425 | Not Available | Positive | 2097859 - 2098244 | 14164.7 |
| hypothetical protein | EBAPG3_RS15015 | Not Available | Positive | 2099251 - 2099817 | 21209.1 |
| type vi secretion system protein tssa | EBAPG3_RS09435 | Not Available | Positive | 2100013 - 2101035 | 37509.9 |
| type vi secretion system contractile sheath small subunit | EBAPG3_RS09440 | Not Available | Positive | 2101216 - 2101728 | 18625.3 |
| type vi secretion system contractile sheath large subunit | EBAPG3_RS09445 | Not Available | Positive | 2101768 - 2103261 | 56011.4 |
| hcp family type vi secretion system effector | EBAPG3_RS09450 | Not Available | Positive | 2103356 - 2103838 | 17068.1 |
| hcp family type vi secretion system effector | EBAPG3_RS09455 | Not Available | Positive | 2104037 - 2104522 | 17351.5 |
| type vi secretion system accessory protein tagj | EBAPG3_RS09460 | Not Available | Positive | 2104553 - 2105398 | 30911.8 |
| type vi secretion system baseplate subunit tsse | EBAPG3_RS09465 | Not Available | Positive | 2105391 - 2105906 | 19418.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
