Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Nitrosomonadales
Family
Nitrosomonadaceae
Genus
Nitrosospira
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Nitrosomonadales |
| Family | Nitrosomonadaceae |
| Genus | Nitrosospira |
| Species | Nitrosospira lacus |
| Strain | strain APG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerobic agricultural surface soils; freshwater lake sediment; terrestrial niche |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
761258 bp
Thymine Count
750491 bp
Guanine Count
874564 bp
Cytosine Count
874775 bp
Genome Length
3261088 bp
Protein-coding Genes
2846 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase d family protein | EBAPG3_RS08190 | Not Available | Negative | 1824523 - 1826220 | 65922.0 |
| crispr-associated helicase/endonuclease cas3 | EBAPG3_RS08195 | Not Available | Positive | 1826660 - 1829305 | 97271.6 |
| type i-e crispr-associated protein cse1/casa | EBAPG3_RS08200 | Not Available | Positive | 1829302 - 1830891 | 58716.1 |
| type i-e crispr-associated protein cse2/casb | EBAPG3_RS08205 | Not Available | Positive | 1830878 - 1831465 | 21670.7 |
| type i-e crispr-associated protein cas7/cse4/casc | EBAPG3_RS08210 | Not Available | Positive | 1831496 - 1832695 | 43413.0 |
| type i-e crispr-associated protein cas5/casd | EBAPG3_RS08215 | Not Available | Positive | 1832697 - 1833416 | 26812.9 |
| type i-e crispr-associated protein cas6/cse3/case | EBAPG3_RS08220 | Not Available | Positive | 1833413 - 1834138 | 26652.2 |
| type i-e crispr-associated endonuclease cas1e | EBAPG3_RS08225 | Not Available | Positive | 1834132 - 1835025 | 32498.3 |
| type i-e crispr-associated endoribonuclease cas2e | EBAPG3_RS08230 | Not Available | Positive | 1834997 - 1835293 | 10939.5 |
| cdp-alcohol phosphatidyltransferase family protein | EBAPG3_RS08235 | Not Available | Negative | 1837310 - 1838026 | 25856.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
