Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Nitrosomonadales
Family
Nitrosomonadaceae
Genus
Nitrosospira
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Nitrosomonadales |
| Family | Nitrosomonadaceae |
| Genus | Nitrosospira |
| Species | Nitrosospira lacus |
| Strain | strain APG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerobic agricultural surface soils; freshwater lake sediment; terrestrial niche |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
761258 bp
Thymine Count
750491 bp
Guanine Count
874564 bp
Cytosine Count
874775 bp
Genome Length
3261088 bp
Protein-coding Genes
2846 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | EBAPG3_RS05405 | Not Available | Negative | 1224315 - 1224827 | 19286.5 |
| hypothetical protein | EBAPG3_RS05415 | Not Available | Negative | 1225622 - 1225978 | 13001.0 |
| phage holin family protein | EBAPG3_RS05420 | Not Available | Negative | 1225975 - 1226343 | 13691.0 |
| yqjd family protein | EBAPG3_RS05425 | Not Available | Negative | 1226376 - 1226768 | 13969.3 |
| 30s ribosomal protein s2 | EBAPG3_RS05430 | Not Available | Positive | 1227169 - 1227906 | 27602.4 |
| translation elongation factor ts | EBAPG3_RS05435 | Not Available | Positive | 1228022 - 1228930 | 32112.7 |
| ump kinase | EBAPG3_RS05440 | Not Available | Positive | 1228939 - 1229655 | 25782.6 |
| ribosome recycling factor | EBAPG3_RS05445 | Not Available | Positive | 1229722 - 1230279 | 20856.6 |
| polyprenyl diphosphate synthase | EBAPG3_RS05450 | Not Available | Positive | 1230382 - 1231188 | 31164.5 |
| phosphatidate cytidylyltransferase | EBAPG3_RS05455 | Not Available | Positive | 1231225 - 1232046 | 29936.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
