Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Nitrosomonadales
Family
Nitrosomonadaceae
Genus
Nitrosospira
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Nitrosomonadales |
| Family | Nitrosomonadaceae |
| Genus | Nitrosospira |
| Species | Nitrosospira lacus |
| Strain | strain APG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerobic agricultural surface soils; freshwater lake sediment; terrestrial niche |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
761258 bp
Thymine Count
750491 bp
Guanine Count
874564 bp
Cytosine Count
874775 bp
Genome Length
3261088 bp
Protein-coding Genes
2846 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase i | EBAPG3_RS05000 | Not Available | Positive | 1131321 - 1134062 | 101223.0 |
| 30s ribosomal protein s16 | EBAPG3_RS05005 | Not Available | Positive | 1134301 - 1134567 | 9933.0 |
| ribosome maturation factor rimm | EBAPG3_RS05010 | Not Available | Positive | 1134590 - 1135102 | 18880.8 |
| trna (guanosine(37)-n1)-methyltransferase trmd | EBAPG3_RS05015 | Not Available | Positive | 1135105 - 1135875 | 28704.4 |
| 50s ribosomal protein l19 | EBAPG3_RS05020 | Not Available | Positive | 1135917 - 1136321 | 14865.0 |
| c-type cytochrome | EBAPG3_RS05025 | Not Available | Negative | 1136499 - 1137116 | 21758.8 |
| duf411 domain-containing protein | EBAPG3_RS05030 | Not Available | Negative | 1137122 - 1137607 | 17268.8 |
| cupredoxin domain-containing protein | EBAPG3_RS05035 | Not Available | Negative | 1137604 - 1138080 | 17183.0 |
| hypothetical protein | EBAPG3_RS05040 | Not Available | Positive | 1138689 - 1139861 | 43363.8 |
| pseudouridine synthase | EBAPG3_RS05045 | Not Available | Negative | 1139985 - 1140539 | 21031.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
