Methylorubrum zatmanii strain PSBB041

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylorubrum

Description

Methylorubrum zatmanii strain PSBB041 is characterized as a rod-shaped bacterium with the presence of flagella, which suggests motility. This trait may facilitate its movement in various environments, contributing to its ecological adaptation. The strain has a single replicon, indicating a streamlined genetic organization that can be advantageous for efficient replication and maintenance of genetic material. The strain is cataloged under the accession NZ_CP021054.1, which provides a reference for genetic and genomic studies. Methylorubrum zatmanii is known for its capability to utilize methanol as a carbon source, which is significant in the context of carbon cycling and bioremediation processes. In ecological terms, the motility conferred by flagella may allow Methylorubrum zatmanii strain PSBB041 to navigate through its habitat effectively, potentially optimizing its access to nutrients and facilitating interactions with other microbial communities. This adaptability may play a role in its survival and ecological function in environments where methanol is present, including those impacted by anthropogenic activities. Overall, the characteristics of this strain highlight its potential significance in microbial ecology and biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylorubrum
SpeciesMethylorubrum zatmanii
Strainstrain PSBB041

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylorubrum zatmanii strain PSBB041 chromosome, complete genome.

Gene Summary

Adenine Count

894209 bp

Thymine Count

885187 bp

Guanine Count

1911427 bp

Cytosine Count

1919525 bp

Genome Length

5610348 bp

Protein-coding Genes

5142 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobaltochelatase subunit cobtB2G69_RS23745Not AvailableNegative5120566 - 512247370682.9
cobaltochelatase subunit cobsB2G69_RS23750Not AvailableNegative5122594 - 512357736789.8
j domain-containing proteinB2G69_RS23755Not AvailableNegative5123917 - 512462425319.8
bola family proteinB2G69_RS23760Not AvailablePositive5124792 - 51250709935.71
alternative ribosome rescue aminoacyl-trna hydrolase arfbB2G69_RS23765Not AvailablePositive5125102 - 512552415525.7
yoak family proteinB2G69_RS23770Not AvailableNegative5125538 - 512629626259.2
methyltransferase domain-containing proteinB2G69_RS23775Not AvailableNegative5126332 - 512732734777.6
ligase-associated dna damage response exonucleaseB2G69_RS23780Not AvailablePositive5127373 - 512844339448.3
cisplatin damage response atp-dependent dna ligaseB2G69_RS23785Not AvailablePositive5128440 - 513028468220.8
secondary thiamine-phosphate synthase enzyme yjbqB2G69_RS23790Not AvailablePositive5130281 - 513076317213.6

Displaying genes 4761 – 4770 of 5245 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.