Sedimentisphaera salicampi strain ST-PulAB-D4

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Phycisphaerae

Order

Sedimentisphaerales

Family

Sedimentisphaeraceae

Genus

Sedimentisphaera

Description

Sedimentisphaera salicampi strain ST-PulAB-D4 is characterized by having a single replicon, which indicates a streamlined genomic organization. The strain is cataloged under the accession number NZ_CP021023.1, facilitating its identification and further study within microbial databases. The classification of Sedimentisphaera salicampi suggests its role in specific ecological niches, particularly in environments where it interacts with sediment. This strain is likely involved in biogeochemical processes given its association with sedimentary habitats. Such environments can be crucial for nutrient cycling and the breakdown of organic materials, which are essential for ecosystem health. Understanding the genomic structure and traits of Sedimentisphaera salicampi strain ST-PulAB-D4 can provide insights into its metabolic capabilities and ecological functions. The presence of a single replicon may reflect adaptations that allow for efficient resource utilization and survival in competitive environments. This efficiency is particularly relevant in sediment ecosystems, where microbial interactions play a significant role in maintaining ecological balance. In summary, the traits of Sedimentisphaera salicampi strain ST-PulAB-D4 highlight its potential ecological significance, particularly in sedimentary environments where its metabolic activities may contribute to nutrient cycling and overall ecosystem function.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPhycisphaerae
OrderSedimentisphaerales
FamilySedimentisphaeraceae
GenusSedimentisphaera
SpeciesSedimentisphaera salicampi
Strainstrain ST-PulAB-D4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sedimentisphaera salicampi strain ST-PulAB-D4 chromosome, complete

Gene Summary

Adenine Count

852708 bp

Thymine Count

861120 bp

Guanine Count

735525 bp

Cytosine Count

742940 bp

Genome Length

3192293 bp

Protein-coding Genes

2377 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-thrNot AvailableNot AvailablePositive1322411 - 1322483Not Available
hypothetical proteinSTSP1_RS04975Not AvailableNegative1323075 - 132366521323.3
right-handed parallel beta-helix repeat-containing proteinSTSP1_RS04980Not AvailableNegative1323700 - 132475236230.9
arabinogalactan endo-beta-1,4-galactanaseSTSP1_RS04985Not AvailableNegative1325035 - 132613541828.2
glycoside hydrolase family 2 tim barrel-domain containing proteinSTSP1_RS04990Not AvailableNegative1326297 - 1329335114068.0
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive1329430 - 1329795Not Available
hypothetical proteinSTSP1_RS05000Not AvailableNegative1329810 - 133088039727.2
l-aspartate oxidaseSTSP1_RS05005Not AvailableNegative1330918 - 133254059459.4
ribosome biogenesis gtpase derSTSP1_RS05010Not AvailableNegative1332550 - 133392051262.9
glucose-6-phosphate isomeraseSTSP1_RS05015Not AvailablePositive1334368 - 133601461782.4

Displaying genes 981 – 990 of 2434 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.