Sedimentisphaera salicampi strain ST-PulAB-D4

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Phycisphaerae

Order

Sedimentisphaerales

Family

Sedimentisphaeraceae

Genus

Sedimentisphaera

Description

Sedimentisphaera salicampi strain ST-PulAB-D4 is characterized by having a single replicon, which indicates a streamlined genomic organization. The strain is cataloged under the accession number NZ_CP021023.1, facilitating its identification and further study within microbial databases. The classification of Sedimentisphaera salicampi suggests its role in specific ecological niches, particularly in environments where it interacts with sediment. This strain is likely involved in biogeochemical processes given its association with sedimentary habitats. Such environments can be crucial for nutrient cycling and the breakdown of organic materials, which are essential for ecosystem health. Understanding the genomic structure and traits of Sedimentisphaera salicampi strain ST-PulAB-D4 can provide insights into its metabolic capabilities and ecological functions. The presence of a single replicon may reflect adaptations that allow for efficient resource utilization and survival in competitive environments. This efficiency is particularly relevant in sediment ecosystems, where microbial interactions play a significant role in maintaining ecological balance. In summary, the traits of Sedimentisphaera salicampi strain ST-PulAB-D4 highlight its potential ecological significance, particularly in sedimentary environments where its metabolic activities may contribute to nutrient cycling and overall ecosystem function.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPhycisphaerae
OrderSedimentisphaerales
FamilySedimentisphaeraceae
GenusSedimentisphaera
SpeciesSedimentisphaera salicampi
Strainstrain ST-PulAB-D4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sedimentisphaera salicampi strain ST-PulAB-D4 chromosome, complete

Gene Summary

Adenine Count

852708 bp

Thymine Count

861120 bp

Guanine Count

735525 bp

Cytosine Count

742940 bp

Genome Length

3192293 bp

Protein-coding Genes

2377 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-hydroxyacid dehydrogenaseSTSP1_RS04615Not AvailablePositive1231769 - 123277037098.8
retropepsin-like aspartic proteaseSTSP1_RS04620Not AvailablePositive1232931 - 123441853813.6
hypothetical proteinSTSP1_RS04625Not AvailablePositive1234488 - 123494917503.7
glycoside hydrolase family 2 proteinSTSP1_RS04630Not AvailableNegative1235028 - 1237955110784.0
uroporphyrinogen decarboxylase family proteinSTSP1_RS04635Not AvailableNegative1237977 - 123906541772.5
dna-binding transcriptional regulatorSTSP1_RS04640Not AvailablePositive1239176 - 124033043405.1
hypothetical proteinSTSP1_RS04645Not AvailablePositive1240422 - 124134833164.3
lamg-like jellyroll fold domain-containing proteinSTSP1_RS04650Not AvailableNegative1241355 - 1244504114103.0
lamg-like jellyroll fold domain-containing proteinSTSP1_RS04655Not AvailableNegative1244612 - 124670876458.3
fecr family proteinSTSP1_RS04660Not AvailableNegative1246762 - 124843561825.1

Displaying genes 911 – 920 of 2434 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.