Sedimentisphaera salicampi strain ST-PulAB-D4

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Phycisphaerae

Order

Sedimentisphaerales

Family

Sedimentisphaeraceae

Genus

Sedimentisphaera

Description

Sedimentisphaera salicampi strain ST-PulAB-D4 is characterized by having a single replicon, which indicates a streamlined genomic organization. The strain is cataloged under the accession number NZ_CP021023.1, facilitating its identification and further study within microbial databases. The classification of Sedimentisphaera salicampi suggests its role in specific ecological niches, particularly in environments where it interacts with sediment. This strain is likely involved in biogeochemical processes given its association with sedimentary habitats. Such environments can be crucial for nutrient cycling and the breakdown of organic materials, which are essential for ecosystem health. Understanding the genomic structure and traits of Sedimentisphaera salicampi strain ST-PulAB-D4 can provide insights into its metabolic capabilities and ecological functions. The presence of a single replicon may reflect adaptations that allow for efficient resource utilization and survival in competitive environments. This efficiency is particularly relevant in sediment ecosystems, where microbial interactions play a significant role in maintaining ecological balance. In summary, the traits of Sedimentisphaera salicampi strain ST-PulAB-D4 highlight its potential ecological significance, particularly in sedimentary environments where its metabolic activities may contribute to nutrient cycling and overall ecosystem function.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPhycisphaerae
OrderSedimentisphaerales
FamilySedimentisphaeraceae
GenusSedimentisphaera
SpeciesSedimentisphaera salicampi
Strainstrain ST-PulAB-D4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sedimentisphaera salicampi strain ST-PulAB-D4 chromosome, complete

Gene Summary

Adenine Count

852708 bp

Thymine Count

861120 bp

Guanine Count

735525 bp

Cytosine Count

742940 bp

Genome Length

3192293 bp

Protein-coding Genes

2377 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l16STSP1_RS10485Not AvailablePositive2735378 - 273580015847.4
50s ribosomal protein l29STSP1_RS10490Not AvailablePositive2735813 - 27360107755.57
30s ribosomal protein s17STSP1_RS10495Not AvailablePositive2736010 - 27362709677.83
50s ribosomal protein l14STSP1_RS10500Not AvailablePositive2736288 - 273667714164.3
50s ribosomal protein l24STSP1_RS10505Not AvailablePositive2736689 - 273701811953.7
50s ribosomal protein l5STSP1_RS10510Not AvailablePositive2737033 - 273757220067.7
type z 30s ribosomal protein s14STSP1_RS10515Not AvailablePositive2737590 - 27377757195.1
30s ribosomal protein s8STSP1_RS10520Not AvailablePositive2737807 - 273820514253.4
50s ribosomal protein l6STSP1_RS10525Not AvailablePositive2738209 - 273877520177.4
50s ribosomal protein l18STSP1_RS10530Not AvailablePositive2738812 - 273917713578.4

Displaying genes 2071 – 2080 of 2434 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.