Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Phycisphaerae
Order
Sedimentisphaerales
Family
Sedimentisphaeraceae
Genus
Sedimentisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Phycisphaerae |
| Order | Sedimentisphaerales |
| Family | Sedimentisphaeraceae |
| Genus | Sedimentisphaera |
| Species | Sedimentisphaera salicampi |
| Strain | strain ST-PulAB-D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
852708 bp
Thymine Count
861120 bp
Guanine Count
735525 bp
Cytosine Count
742940 bp
Genome Length
3192293 bp
Protein-coding Genes
2377 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | STSP1_RS06655 | Not Available | Negative | 1778575 - 1780455 | 70841.2 |
| type vi secretion system baseplate subunit tsse | STSP1_RS06660 | Not Available | Negative | 1780452 - 1780835 | 14240.2 |
| type vi secretion system accessory protein tagj | STSP1_RS06665 | Not Available | Negative | 1780918 - 1781691 | 29330.2 |
| hcp family type vi secretion system effector | STSP1_RS06670 | Not Available | Negative | 1781726 - 1782217 | 18065.1 |
| type vi secretion system contractile sheath large subunit | STSP1_RS06675 | Not Available | Negative | 1782257 - 1783756 | 56463.1 |
| type vi secretion system contractile sheath small subunit | STSP1_RS06680 | Not Available | Negative | 1783756 - 1784286 | 19688.3 |
| type vi secretion system protein tssa | STSP1_RS06685 | Not Available | Negative | 1784308 - 1785360 | 39567.8 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | STSP1_RS06690 | Not Available | Positive | 1785978 - 1789193 | 122345.0 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | STSP1_RS06695 | Not Available | Positive | 1789346 - 1790347 | 34750.9 |
| metallophosphoesterase | STSP1_RS06700 | Not Available | Positive | 1790364 - 1791311 | 35845.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
