Sedimentisphaera salicampi strain ST-PulAB-D4

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Phycisphaerae

Order

Sedimentisphaerales

Family

Sedimentisphaeraceae

Genus

Sedimentisphaera

Description

Sedimentisphaera salicampi strain ST-PulAB-D4 is characterized by having a single replicon, which indicates a streamlined genomic organization. The strain is cataloged under the accession number NZ_CP021023.1, facilitating its identification and further study within microbial databases. The classification of Sedimentisphaera salicampi suggests its role in specific ecological niches, particularly in environments where it interacts with sediment. This strain is likely involved in biogeochemical processes given its association with sedimentary habitats. Such environments can be crucial for nutrient cycling and the breakdown of organic materials, which are essential for ecosystem health. Understanding the genomic structure and traits of Sedimentisphaera salicampi strain ST-PulAB-D4 can provide insights into its metabolic capabilities and ecological functions. The presence of a single replicon may reflect adaptations that allow for efficient resource utilization and survival in competitive environments. This efficiency is particularly relevant in sediment ecosystems, where microbial interactions play a significant role in maintaining ecological balance. In summary, the traits of Sedimentisphaera salicampi strain ST-PulAB-D4 highlight its potential ecological significance, particularly in sedimentary environments where its metabolic activities may contribute to nutrient cycling and overall ecosystem function.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPhycisphaerae
OrderSedimentisphaerales
FamilySedimentisphaeraceae
GenusSedimentisphaera
SpeciesSedimentisphaera salicampi
Strainstrain ST-PulAB-D4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sedimentisphaera salicampi strain ST-PulAB-D4 chromosome, complete

Gene Summary

Adenine Count

852708 bp

Thymine Count

861120 bp

Guanine Count

735525 bp

Cytosine Count

742940 bp

Genome Length

3192293 bp

Protein-coding Genes

2377 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSTSP1_RS12480Not AvailablePositive1563778 - 15639546410.48
chc2 zinc finger domain-containing proteinSTSP1_RS05855Not AvailableNegative1564221 - 156482022060.2
hypothetical proteinSTSP1_RS12395Not AvailableNegative1564820 - 156532318715.9
aspartate-semialdehyde dehydrogenaseSTSP1_RS05870Not AvailablePositive1566125 - 156713236706.9
phosphatidate cytidylyltransferaseSTSP1_RS05875Not AvailablePositive1567195 - 156805830977.6
crispr-associated endonuclease cas2STSP1_RS05880Not AvailableNegative1570861 - 157119013127.0
type ii crispr-associated endonuclease cas1STSP1_RS05885Not AvailableNegative1571200 - 157210233760.9
type ii crispr rna-guided endonuclease cas9STSP1_RS05890Not AvailableNegative1572109 - 1575096115236.0
50s ribosomal protein l35STSP1_RS05895Not AvailablePositive1575428 - 15756347796.85
50s ribosomal protein l20STSP1_RS05900Not AvailablePositive1575728 - 157608113276.4

Displaying genes 1161 – 1170 of 2434 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.