Pantoea vagans strain FBS135

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea vagans strain FBS135 is a Gram-negative bacterium characterized by its rod shape and facultative anaerobic metabolism. This strain is notable for its non-motility, despite the presence of flagella, which may indicate a reduced capacity for movement in its environment. Pantoea vagans is classified as mesophilic, thriving in moderate temperature ranges suitable for various biological activities. This strain possesses five replicons, suggesting a complex genomic structure that may contribute to its adaptability and resilience in various host-associated habitats. Additionally, it has a double membrane structure, which is typical of Gram-negative bacteria and may play a role in its interactions with the host environment. Pantoea vagans strain FBS135 is considered free-living, indicating that it can exist independently in its habitat, potentially engaging in various biotic relationships. Its non-sporulating nature suggests that it does not produce spores as a means of survival under unfavorable conditions, relying instead on other mechanisms to persist. The presence of multiple accessions (NZ_CP020820.1; NZ_CP022517.1; NZ_CP022518.1; NZ_CP022519.1; NZ_CP022520.1) highlights the genetic diversity within this strain, which may be important for its ecological roles and interactions in its host-associated environments. Understanding the traits of Pantoea vagans strain FBS135 can provide insights into its ecological functions, including its potential roles in plant health and soil microbiomes, emphasizing the importance of microbial diversity in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea vagans
Strainstrain FBS135

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea vagans strain FBS135
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea vagans strain FBS135 chromosome, complete genome.

Gene Summary

Adenine Count

909760 bp

Thymine Count

906701 bp

Guanine Count

1102500 bp

Cytosine Count

1104790 bp

Genome Length

4023751 bp

Protein-coding Genes

3558 genes

Non-Coding Genes

244 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-metNot AvailableNot AvailablePositive848469 - 848545Not Available
murein transglycosylase aB9D02_RS04060Not AvailablePositive848749 - 84989741999.8
trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcdaB9D02_RS04065Not AvailablePositive849946 - 85075828826.8
cysteine desulfurase sulfur acceptor subunit csdeB9D02_RS04070Not AvailableNegative850737 - 85119216517.7
cysteine desulfurase csdaB9D02_RS04075Not AvailableNegative851195 - 85240343330.7
ygdi/ygdr family lipoproteinB9D02_RS04080Not AvailablePositive852613 - 8528347911.46
transcriptional regulator gcvaB9D02_RS04085Not AvailablePositive853170 - 85408734516.6
duf423 domain-containing proteinB9D02_RS04090Not AvailablePositive854138 - 85453314349.9
23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmmB9D02_RS04095Not AvailablePositive854526 - 85562642181.0
flap endonuclease xniB9D02_RS04100Not AvailableNegative855651 - 85640627675.3

Displaying genes 971 – 980 of 4690 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.