Roseovarius mucosus strain SMR3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius mucosus strain SMR3 is a Gram-negative bacterium characterized by a single replicon, which is noted in its genetic makeup. This strain is cataloged under the accession number NZ_CP020474.1, indicating its sequence data is accessible for further research and analysis. The Gram-negative classification of R. mucosus strain SMR3 suggests that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which may influence its interactions with the environment and its susceptibility to various antimicrobial agents. This structural feature is typical of many bacteria within the Roseovarius genus, which are often associated with marine environments and can play significant ecological roles. The presence of a single replicon in R. mucosus strain SMR3 may indicate streamlined genetic regulation and replication processes, potentially contributing to its adaptability in specific ecological niches. Understanding the genomic structure of this strain can provide insights into its metabolic capabilities and ecological interactions, particularly in marine ecosystems. In summary, the characteristics of Roseovarius mucosus strain SMR3, including its Gram-negative nature and genetic configuration, position it as a potentially significant player in marine microbiology, likely influencing nutrient cycling and the dynamics of microbial communities in its environment. Further study could elucidate its role and contributions to marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius mucosus
Strainstrain SMR3

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseovarius mucosus strain SMR3 chromosome, complete genome.

Gene Summary

Adenine Count

816517 bp

Thymine Count

812506 bp

Guanine Count

1257348 bp

Cytosine Count

1284625 bp

Genome Length

4170996 bp

Protein-coding Genes

3868 genes

Non-Coding Genes

145 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf6477 family proteinROSMUCSMR3_RS19700Not AvailableNegative4130895 - 413118811016.6
duf6456 domain-containing proteinROSMUCSMR3_RS19705Not AvailablePositive4131427 - 413254240907.9
hydrogen peroxide-inducible genes activatorROSMUCSMR3_RS19710Not AvailablePositive4132615 - 413361335847.7
lipoyl synthaseROSMUCSMR3_RS19715Not AvailablePositive4133736 - 413468034869.7
ycbk family proteinROSMUCSMR3_RS19720Not AvailableNegative4134776 - 413534520601.7
murein l,d-transpeptidaseROSMUCSMR3_RS19725Not AvailablePositive4135727 - 413729558433.6
acyl carrier proteinROSMUCSMR3_RS19730Not AvailablePositive4137515 - 41377759163.71
beta-ketoacyl-[acyl-carrier-protein] synthase family proteinROSMUCSMR3_RS19735Not AvailablePositive4137772 - 413898342805.3
invasion associated locus b family proteinROSMUCSMR3_RS19740Not AvailableNegative4139043 - 413966621994.3
helicase hera-like domain-containing proteinROSMUCSMR3_RS19745Not AvailablePositive4140083 - 414164255790.5

Displaying genes 3981 – 3990 of 4013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.