Roseovarius mucosus strain SMR3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius mucosus strain SMR3 is a Gram-negative bacterium characterized by a single replicon, which is noted in its genetic makeup. This strain is cataloged under the accession number NZ_CP020474.1, indicating its sequence data is accessible for further research and analysis. The Gram-negative classification of R. mucosus strain SMR3 suggests that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which may influence its interactions with the environment and its susceptibility to various antimicrobial agents. This structural feature is typical of many bacteria within the Roseovarius genus, which are often associated with marine environments and can play significant ecological roles. The presence of a single replicon in R. mucosus strain SMR3 may indicate streamlined genetic regulation and replication processes, potentially contributing to its adaptability in specific ecological niches. Understanding the genomic structure of this strain can provide insights into its metabolic capabilities and ecological interactions, particularly in marine ecosystems. In summary, the characteristics of Roseovarius mucosus strain SMR3, including its Gram-negative nature and genetic configuration, position it as a potentially significant player in marine microbiology, likely influencing nutrient cycling and the dynamics of microbial communities in its environment. Further study could elucidate its role and contributions to marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius mucosus
Strainstrain SMR3

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseovarius mucosus strain SMR3 chromosome, complete genome.

Gene Summary

Adenine Count

816517 bp

Thymine Count

812506 bp

Guanine Count

1257348 bp

Cytosine Count

1284625 bp

Genome Length

4170996 bp

Protein-coding Genes

3868 genes

Non-Coding Genes

145 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-leuNot AvailableNot AvailablePositive3372997 - 3373082Not Available
mate family efflux transporterROSMUCSMR3_RS16080Not AvailableNegative3373498 - 337489248077.3
hypothetical proteinROSMUCSMR3_RS21270Not AvailableNegative3374975 - 337525910194.8
isochorismatase family cysteine hydrolaseROSMUCSMR3_RS16085Not AvailableNegative3375446 - 337607522923.0
xanthine dehydrogenase family protein molybdopterin-binding subunitROSMUCSMR3_RS16090Not AvailableNegative3376199 - 337844279229.2
(2fe-2s)-binding proteinROSMUCSMR3_RS16095Not AvailableNegative3378446 - 337890415977.2
arac family transcriptional regulatorROSMUCSMR3_RS16100Not AvailablePositive3379091 - 338009236668.0
murr/rpir family transcriptional regulatorROSMUCSMR3_RS16105Not AvailableNegative3380454 - 338130830307.3
transporter substrate-binding domain-containing proteinROSMUCSMR3_RS16110Not AvailablePositive3381491 - 338230029458.0
amino acid abc transporter permeaseROSMUCSMR3_RS16115Not AvailablePositive3382380 - 338312327304.7

Displaying genes 3351 – 3360 of 4013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.