Roseovarius mucosus strain SMR3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius mucosus strain SMR3 is a Gram-negative bacterium characterized by a single replicon, which is noted in its genetic makeup. This strain is cataloged under the accession number NZ_CP020474.1, indicating its sequence data is accessible for further research and analysis. The Gram-negative classification of R. mucosus strain SMR3 suggests that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which may influence its interactions with the environment and its susceptibility to various antimicrobial agents. This structural feature is typical of many bacteria within the Roseovarius genus, which are often associated with marine environments and can play significant ecological roles. The presence of a single replicon in R. mucosus strain SMR3 may indicate streamlined genetic regulation and replication processes, potentially contributing to its adaptability in specific ecological niches. Understanding the genomic structure of this strain can provide insights into its metabolic capabilities and ecological interactions, particularly in marine ecosystems. In summary, the characteristics of Roseovarius mucosus strain SMR3, including its Gram-negative nature and genetic configuration, position it as a potentially significant player in marine microbiology, likely influencing nutrient cycling and the dynamics of microbial communities in its environment. Further study could elucidate its role and contributions to marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius mucosus
Strainstrain SMR3

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseovarius mucosus strain SMR3 chromosome, complete genome.

Gene Summary

Adenine Count

816517 bp

Thymine Count

812506 bp

Guanine Count

1257348 bp

Cytosine Count

1284625 bp

Genome Length

4170996 bp

Protein-coding Genes

3868 genes

Non-Coding Genes

145 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dmt family transporterROSMUCSMR3_RS13180Not AvailablePositive2758424 - 275929031318.3
nad(p)-dependent oxidoreductaseROSMUCSMR3_RS13185Not AvailablePositive2759452 - 276078046547.4
nad-dependent dihydropyrimidine dehydrogenase subunit preaROSMUCSMR3_RS13190Not AvailablePositive2760784 - 276208846986.0
glycosyltransferase family 25 proteinROSMUCSMR3_RS13195Not AvailableNegative2762093 - 276281526196.3
aldehyde dehydrogenase family proteinROSMUCSMR3_RS13200Not AvailableNegative2762820 - 276426250932.7
peroxiredoxinROSMUCSMR3_RS13205Not AvailablePositive2764395 - 276504823479.1
methyltransferaseROSMUCSMR3_RS13210Not AvailableNegative2765288 - 276592022542.3
succinylglutamate desuccinylase/aspartoacylase family proteinROSMUCSMR3_RS13215Not AvailablePositive2766035 - 276706936682.6
log family proteinROSMUCSMR3_RS13220Not AvailableNegative2767148 - 276796330260.1
serine/threonine dehydrataseROSMUCSMR3_RS13225Not AvailablePositive2768044 - 276895830681.9

Displaying genes 2761 – 2770 of 4013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.