Roseovarius mucosus strain SMR3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius mucosus strain SMR3 is a Gram-negative bacterium characterized by a single replicon, which is noted in its genetic makeup. This strain is cataloged under the accession number NZ_CP020474.1, indicating its sequence data is accessible for further research and analysis. The Gram-negative classification of R. mucosus strain SMR3 suggests that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which may influence its interactions with the environment and its susceptibility to various antimicrobial agents. This structural feature is typical of many bacteria within the Roseovarius genus, which are often associated with marine environments and can play significant ecological roles. The presence of a single replicon in R. mucosus strain SMR3 may indicate streamlined genetic regulation and replication processes, potentially contributing to its adaptability in specific ecological niches. Understanding the genomic structure of this strain can provide insights into its metabolic capabilities and ecological interactions, particularly in marine ecosystems. In summary, the characteristics of Roseovarius mucosus strain SMR3, including its Gram-negative nature and genetic configuration, position it as a potentially significant player in marine microbiology, likely influencing nutrient cycling and the dynamics of microbial communities in its environment. Further study could elucidate its role and contributions to marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius mucosus
Strainstrain SMR3

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseovarius mucosus strain SMR3 chromosome, complete genome.

Gene Summary

Adenine Count

816517 bp

Thymine Count

812506 bp

Guanine Count

1257348 bp

Cytosine Count

1284625 bp

Genome Length

4170996 bp

Protein-coding Genes

3868 genes

Non-Coding Genes

145 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseROSMUCSMR3_RS09230Not AvailablePositive1924562 - 192538628401.4
polyprenyl synthetase family proteinROSMUCSMR3_RS09235Not AvailableNegative1925379 - 192638036031.1
duf2007 domain-containing proteinROSMUCSMR3_RS09240Not AvailablePositive1926437 - 19266527940.52
trna1(val) (adenine(37)-n6)-methyltransferaseROSMUCSMR3_RS09245Not AvailablePositive1926642 - 192741527298.7
ydch family proteinROSMUCSMR3_RS09250Not AvailablePositive1927538 - 19277086378.72
alpha-ketoglutarate-dependent dioxygenase alkb family proteinROSMUCSMR3_RS09255Not AvailableNegative1927787 - 192839522150.9
molecular chaperone dnakROSMUCSMR3_RS09260Not AvailablePositive1928606 - 193051368598.1
molecular chaperone dnajROSMUCSMR3_RS09265Not AvailablePositive1930592 - 193175241212.7
radc family proteinROSMUCSMR3_RS09270Not AvailablePositive1931840 - 193259527751.4
substrate-binding domain-containing proteinROSMUCSMR3_RS09275Not AvailableNegative1932602 - 193415856405.1

Displaying genes 1971 – 1980 of 4013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.