Roseovarius mucosus strain SMR3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius mucosus strain SMR3 is a Gram-negative bacterium characterized by a single replicon, which is noted in its genetic makeup. This strain is cataloged under the accession number NZ_CP020474.1, indicating its sequence data is accessible for further research and analysis. The Gram-negative classification of R. mucosus strain SMR3 suggests that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which may influence its interactions with the environment and its susceptibility to various antimicrobial agents. This structural feature is typical of many bacteria within the Roseovarius genus, which are often associated with marine environments and can play significant ecological roles. The presence of a single replicon in R. mucosus strain SMR3 may indicate streamlined genetic regulation and replication processes, potentially contributing to its adaptability in specific ecological niches. Understanding the genomic structure of this strain can provide insights into its metabolic capabilities and ecological interactions, particularly in marine ecosystems. In summary, the characteristics of Roseovarius mucosus strain SMR3, including its Gram-negative nature and genetic configuration, position it as a potentially significant player in marine microbiology, likely influencing nutrient cycling and the dynamics of microbial communities in its environment. Further study could elucidate its role and contributions to marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius mucosus
Strainstrain SMR3

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseovarius mucosus strain SMR3 chromosome, complete genome.

Gene Summary

Adenine Count

816517 bp

Thymine Count

812506 bp

Guanine Count

1257348 bp

Cytosine Count

1284625 bp

Genome Length

4170996 bp

Protein-coding Genes

3868 genes

Non-Coding Genes

145 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorROSMUCSMR3_RS07085Not AvailableNegative1446468 - 144737333005.5
duf4399 domain-containing proteinROSMUCSMR3_RS07090Not AvailablePositive1447567 - 144801015411.4
nadph-dependent 2,4-dienoyl-coa reductaseROSMUCSMR3_RS07095Not AvailableNegative1448017 - 145004471599.0
manganese-dependent inorganic pyrophosphataseROSMUCSMR3_RS07100Not AvailableNegative1450194 - 145111432754.4
co-chaperone groesROSMUCSMR3_RS07105Not AvailablePositive1451372 - 145165910083.2
chaperonin groelROSMUCSMR3_RS07110Not AvailablePositive1451714 - 145335457765.7
aquaporinROSMUCSMR3_RS07115Not AvailablePositive1453523 - 145420622578.0
dmt family transporterROSMUCSMR3_RS07120Not AvailablePositive1454363 - 145524129695.6
nudix domain-containing proteinROSMUCSMR3_RS07125Not AvailableNegative1455208 - 145565116193.4
thiamine pyrophosphate-dependent enzymeROSMUCSMR3_RS07130Not AvailablePositive1455775 - 145746059690.4

Displaying genes 1531 – 1540 of 4013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.