Paracoccus yeei strain FDAARGOS_252

Gram-negativeCocciNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus yeei strain FDAARGOS_252 is a Gram-negative, cocci-shaped bacterium classified as a chemoheterotroph, indicating that it derives its energy from organic compounds. This strain is strictly aerobic, requiring oxygen for its metabolic processes, and is characterized by the presence of flagella, although it is reported to be non-motile. The strain thrives in soil environments, suggesting its role in nutrient cycling and potential interactions with various soil organisms. Paracoccus yeei is mesophilic, indicating that it prefers moderate temperature ranges for optimal growth. This adaptability to mesophilic conditions is common among soil-dwelling microorganisms, allowing it to thrive in a variety of terrestrial ecosystems. Genetically, Paracoccus yeei strain FDAARGOS_252 contains four replicons, which may contribute to its genetic diversity and adaptability. The strain is also nonsporulating, indicating that it does not form spores, a trait that may influence its survival strategies in fluctuating environmental conditions. The presence of this strain in soil habitats highlights its potential ecological role in decomposing organic matter and recycling nutrients, contributing to soil health and fertility. Understanding the traits of Paracoccus yeei can provide insights into microbial community dynamics and the functions of soil microbiomes. The accessions associated with this strain, including NZ_CP020441.2, NZ_CP020443.2, NZ_CP020445.2, and NZ_CP020446.2, allow for further genomic exploration and study of its capabilities and interactions within its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus yeei
Strainstrain FDAARGOS_252

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Paracoccus yeei strain FDAARGOS_252
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paracoccus yeei strain FDAARGOS_252


Gene Summary

Adenine Count

27447 bp

Thymine Count

26923 bp

Guanine Count

59598 bp

Cytosine Count

60197 bp

Genome Length

174165 bp

Protein-coding Genes

141 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is256 family transposaseA6J80_RS22225Not AvailableNegative96742 - 9828055141.9
rhamnose abc transporter substrate-binding proteinA6J80_RS22230Not AvailableNegative98348 - 9934034221.9
deor/glpr family dna-binding transcription regulatorA6J80_RS22235Not AvailableNegative99375 - 10017829341.7
bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenaseA6J80_RS22240Not AvailablePositive100365 - 10246775864.5
l-rhamnose catabolism isomeraseA6J80_RS22245Not AvailablePositive102473 - 10362441872.1
sugar-binding transcriptional regulatorA6J80_RS22250Not AvailableNegative103581 - 10453734287.4
extracellular solute-binding proteinA6J80_RS22255Not AvailablePositive104761 - 10619753108.4
carbohydrate abc transporter permeaseA6J80_RS22260Not AvailablePositive106271 - 10714632550.6
carbohydrate abc transporter permeaseA6J80_RS22265Not AvailablePositive107152 - 10799131193.6
duf2160 family membrane proteinA6J80_RS22270Not AvailablePositive107995 - 1081837124.1

Displaying genes 81 – 90 of 581 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.