Paracoccus yeei strain FDAARGOS_252

Gram-negativeCocciNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus yeei strain FDAARGOS_252 is a Gram-negative, cocci-shaped bacterium classified as a chemoheterotroph, indicating that it derives its energy from organic compounds. This strain is strictly aerobic, requiring oxygen for its metabolic processes, and is characterized by the presence of flagella, although it is reported to be non-motile. The strain thrives in soil environments, suggesting its role in nutrient cycling and potential interactions with various soil organisms. Paracoccus yeei is mesophilic, indicating that it prefers moderate temperature ranges for optimal growth. This adaptability to mesophilic conditions is common among soil-dwelling microorganisms, allowing it to thrive in a variety of terrestrial ecosystems. Genetically, Paracoccus yeei strain FDAARGOS_252 contains four replicons, which may contribute to its genetic diversity and adaptability. The strain is also nonsporulating, indicating that it does not form spores, a trait that may influence its survival strategies in fluctuating environmental conditions. The presence of this strain in soil habitats highlights its potential ecological role in decomposing organic matter and recycling nutrients, contributing to soil health and fertility. Understanding the traits of Paracoccus yeei can provide insights into microbial community dynamics and the functions of soil microbiomes. The accessions associated with this strain, including NZ_CP020441.2, NZ_CP020443.2, NZ_CP020445.2, and NZ_CP020446.2, allow for further genomic exploration and study of its capabilities and interactions within its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus yeei
Strainstrain FDAARGOS_252

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Paracoccus yeei strain FDAARGOS_252
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paracoccus yeei strain FDAARGOS_252 plasmid unnamed5, complete

Gene Summary

Adenine Count

27447 bp

Thymine Count

26923 bp

Guanine Count

59598 bp

Cytosine Count

60197 bp

Genome Length

174165 bp

Protein-coding Genes

141 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
copg family antitoxinA6J80_RS22675Not AvailableNegative32850 - 330085874.36
transposaseA6J80_RS22680Not AvailableNegative32963 - 3325911062.5
recombinase family proteinA6J80_RS22685Not AvailableNegative33745 - 3428720255.5
type ii toxin-antitoxin system rele/pare family toxinA6J80_RS22690Not AvailableNegative34284 - 3460111757.2
type ii toxin-antitoxin system pard family antitoxinA6J80_RS22695Not AvailableNegative34591 - 348339047.62
mu transposase c-terminal domain-containing proteinA6J80_RS22700Not AvailablePositive35163 - 3683961953.8
tnib family ntp-binding proteinA6J80_RS22705Not AvailablePositive36842 - 3775033736.3
tniq family proteinA6J80_RS22710Not AvailablePositive37747 - 3902147467.2
is5 family transposaseA6J80_RS22715Not AvailableNegative39057 - 3985930086.0
duf305 domain-containing proteinA6J80_RS22720Not AvailablePositive39916 - 4045819806.4

Displaying genes 571 – 580 of 581 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.