Paracoccus yeei strain FDAARGOS_252

Gram-negativeCocciNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus yeei strain FDAARGOS_252 is a Gram-negative, cocci-shaped bacterium classified as a chemoheterotroph, indicating that it derives its energy from organic compounds. This strain is strictly aerobic, requiring oxygen for its metabolic processes, and is characterized by the presence of flagella, although it is reported to be non-motile. The strain thrives in soil environments, suggesting its role in nutrient cycling and potential interactions with various soil organisms. Paracoccus yeei is mesophilic, indicating that it prefers moderate temperature ranges for optimal growth. This adaptability to mesophilic conditions is common among soil-dwelling microorganisms, allowing it to thrive in a variety of terrestrial ecosystems. Genetically, Paracoccus yeei strain FDAARGOS_252 contains four replicons, which may contribute to its genetic diversity and adaptability. The strain is also nonsporulating, indicating that it does not form spores, a trait that may influence its survival strategies in fluctuating environmental conditions. The presence of this strain in soil habitats highlights its potential ecological role in decomposing organic matter and recycling nutrients, contributing to soil health and fertility. Understanding the traits of Paracoccus yeei can provide insights into microbial community dynamics and the functions of soil microbiomes. The accessions associated with this strain, including NZ_CP020441.2, NZ_CP020443.2, NZ_CP020445.2, and NZ_CP020446.2, allow for further genomic exploration and study of its capabilities and interactions within its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus yeei
Strainstrain FDAARGOS_252

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Paracoccus yeei strain FDAARGOS_252
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paracoccus yeei strain FDAARGOS_252 plasmid unnamed5, complete

Gene Summary

Adenine Count

27447 bp

Thymine Count

26923 bp

Guanine Count

59598 bp

Cytosine Count

60197 bp

Genome Length

174165 bp

Protein-coding Genes

141 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class ii glutamine amidotransferaseA6J80_RS01545Not AvailablePositive91325 - 9221231824.0
gxgxg domain-containing proteinA6J80_RS01550Not AvailablePositive92214 - 9289723840.3
fmn-binding glutamate synthase family proteinA6J80_RS01555Not AvailablePositive92909 - 9423447116.4
type iii glutamate--ammonia ligaseA6J80_RS01560Not AvailablePositive94303 - 9560747732.7
fadr/gntr family transcriptional regulatorA6J80_RS01565Not AvailablePositive95766 - 9641323763.1
abc transporter substrate-binding proteinA6J80_RS01570Not AvailableNegative96397 - 9768346603.2
nad(p)-binding domain-containing proteinA6J80_RS01575Not AvailablePositive97847 - 9919051470.2
duf1989 domain-containing proteinA6J80_RS01580Not AvailablePositive99219 - 10158285938.0
apc family permeaseA6J80_RS01585Not AvailablePositive101880 - 10366463308.6
aminomethyltransferase family proteinA6J80_RS01590Not AvailablePositive103728 - 10486741814.9

Displaying genes 361 – 370 of 581 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.