Rhodothermaceae bacterium RA

Kingdom

Pseudomonadati

Phylum

Rhodothermota

Class

Rhodothermia

Order

Rhodothermales

Family

Rhodothermaceae

Genus

Description

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodothermaceae bacterium RA

NZ_CP020382.1

Gene Summary

Adenine Count

735352 bp

Thymine Count

741650 bp

Guanine Count

1590139 bp

Cytosine Count

1586081 bp

Genome Length

4653222 bp

Protein-coding Genes

3687 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
energy transducer tonbAWN76_RS19015Not Available+1 - 2438890.91
signal peptidase iAWN76_RS18565O67088+496 - 108922569.6
l,d-transpeptidaseAWN76_RS00010Not Available-1099 - 206136752.4
hypothetical proteinAWN76_RS00015Not Available-2116 - 262818360.0
exodeoxyribonuclease vii small subunitAWN76_RS00020Not Available-2691 - 29158310.56
sdr family nad(p)-dependent oxidoreductaseAWN76_RS00025Q5HGK2+3103 - 387927113.6
hypothetical proteinAWN76_RS00030Not Available-3970 - 503140846.9
exodeoxyribonuclease vii large subunitAWN76_RS00035Q2S4K5-5322 - 658146888.2
low molecular weight protein-tyrosine-phosphataseAWN76_RS00040Q55535+6684 - 719919929.4
fructosamine kinase family proteinAWN76_RS00045P74594+7196 - 807431928.7

Displaying genes 1 – 10 of 3737 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

207 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 207 metabolites