Halopseudomonas phragmitis strain S-6-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Halopseudomonas

Description

Halopseudomonas phragmitis strain S-6-2 is characterized by having a single replicon and is associated with accession number NZ_CP020100.1. This strain belongs to the genus Halopseudomonas, which is known for its ability to thrive in saline environments. Halopseudomonas species are typically aerobic, and they exhibit diverse metabolic capabilities, which may include the degradation of various organic compounds. While specific metabolic traits of strain S-6-2 are not detailed in the provided evidence, the ecological significance of such bacteria is noteworthy. They often play a role in biogeochemical cycles, particularly in environments where salt concentration is high, such as coastal regions and saline wetlands. The presence of Halopseudomonas phragmitis strain S-6-2 in these ecosystems suggests its potential involvement in nutrient cycling and organic matter decomposition. This can contribute to the health of the ecosystem by supporting plant growth and influencing microbial community dynamics. Overall, the existence of this strain highlights the adaptability of microorganisms to extreme conditions and their essential functions in maintaining ecological balance in saline habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusHalopseudomonas
SpeciesHalopseudomonas phragmitis
Strainstrain S-6-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopseudomonas phragmitis strain S-6-2 chromosome, complete

Gene Summary

Adenine Count

800396 bp

Thymine Count

810405 bp

Guanine Count

1210820 bp

Cytosine Count

1213532 bp

Genome Length

4035153 bp

Protein-coding Genes

3561 genes

Non-Coding Genes

201 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcription antitermination factor nusbBVH74_RS03155Not AvailableNegative696170 - 69664917670.2
6,7-dimethyl-8-ribityllumazine synthaseBVH74_RS03160Not AvailableNegative696650 - 69712616647.3
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase iiBVH74_RS03165Not AvailableNegative697206 - 69830340067.3
riboflavin synthaseBVH74_RS03170Not AvailableNegative698326 - 69899423636.3
sodium:proton antiporter nhadBVH74_RS03175Not AvailableNegative699025 - 70028445035.3
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdBVH74_RS03180Not AvailableNegative700297 - 70141839819.1
transcriptional regulator nrdrBVH74_RS03185Not AvailableNegative701420 - 70189318223.9
amp-binding proteinBVH74_RS03190Not AvailableNegative701969 - 70345954226.1
lysr family transcriptional regulatorBVH74_RS03195Not AvailablePositive703568 - 70449734745.0
class i sam-dependent methyltransferaseBVH74_RS03200Not AvailablePositive704543 - 70521424526.3

Displaying genes 811 – 820 of 3762 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.